From 11b308e7363e937966b035b4891db32b4eece3bf Mon Sep 17 00:00:00 2001 From: Tor Aamodt Date: Fri, 1 Oct 2010 08:55:28 -0800 Subject: integrating recent changes from fermi-test into fermi (i'll use "fermi" for more disruptive changes to the pipeline model such as updating the MSHRs and getting rid of the warp tracker, ripping out DWF, etc...) [git-p4: depot-paths = "//depot/gpgpu_sim_research/fermi/distribution/": change = 7805] --- .../DG/3rdParty/ParMetis-3.1/METISLib/kwayvolfm.c | 1778 -------------------- 1 file changed, 1778 deletions(-) delete mode 100644 benchmarks/CUDA/DG/3rdParty/ParMetis-3.1/METISLib/kwayvolfm.c (limited to 'benchmarks/CUDA/DG/3rdParty/ParMetis-3.1/METISLib/kwayvolfm.c') diff --git a/benchmarks/CUDA/DG/3rdParty/ParMetis-3.1/METISLib/kwayvolfm.c b/benchmarks/CUDA/DG/3rdParty/ParMetis-3.1/METISLib/kwayvolfm.c deleted file mode 100644 index 4e1112d..0000000 --- a/benchmarks/CUDA/DG/3rdParty/ParMetis-3.1/METISLib/kwayvolfm.c +++ /dev/null @@ -1,1778 +0,0 @@ -/* - * kwayvolfm.c - * - * This file contains code that implements the multilevel k-way refinement - * - * Started 7/8/98 - * George - * - * $Id: kwayvolfm.c,v 1.2 2003/07/31 06:14:01 karypis Exp $ - * - */ - -#include - - -/************************************************************************* -* This function performs k-way refinement -**************************************************************************/ -void Random_KWayVolRefine(CtrlType *ctrl, GraphType *graph, int nparts, float *tpwgts, - float ubfactor, int npasses, int ffactor) -{ - int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; - int from, me, to, oldcut, oldvol, vwgt; - idxtype *xadj, *adjncy, *adjwgt; - idxtype *where, *pwgts, *perm, *bndptr, *bndind, *minwgt, *maxwgt, *itpwgts, *updind, *marker, *phtable; - VEDegreeType *myedegrees; - VRInfoType *myrinfo; - - nvtxs = graph->nvtxs; - xadj = graph->xadj; - adjncy = graph->adjncy; - adjwgt = graph->adjwgt; - - bndptr = graph->bndptr; - bndind = graph->bndind; - - where = graph->where; - pwgts = graph->pwgts; - - /* Setup the weight intervals of the various subdomains */ - minwgt = idxwspacemalloc(ctrl, nparts); - maxwgt = idxwspacemalloc(ctrl, nparts); - itpwgts = idxwspacemalloc(ctrl, nparts); - tvwgt = idxsum(nparts, pwgts); - ASSERT(tvwgt == idxsum(nvtxs, graph->vwgt)); - - updind = idxmalloc(nvtxs, "Random_KWayVolRefine: updind"); - marker = idxsmalloc(nvtxs, 0, "Random_KWayVolRefine: marker"); - phtable = idxsmalloc(nparts, -1, "Random_KWayVolRefine: phtable"); - - for (i=0; idbglvl, DBG_REFINE, - printf("VolPart: [%5d %5d]-[%5d %5d], Balance: %3.2f, Nv-Nb[%5d %5d]. Cut: %5d, Vol: %5d\n", - pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)], minwgt[0], maxwgt[0], - 1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nvtxs, graph->nbnd, - graph->mincut, graph->minvol)); - - for (pass=0; passmincut); - - oldcut = graph->mincut; - oldvol = graph->minvol; - - RandomPermute(graph->nbnd, perm, 1); - for (nmoves=iii=0; iiinbnd; iii++) { - ii = perm[iii]; - if (ii >= graph->nbnd) - continue; - i = bndind[ii]; - myrinfo = graph->vrinfo+i; - - if (myrinfo->gv >= 0) { /* Total volume gain is too high */ - from = where[i]; - vwgt = graph->vwgt[i]; - - if (myrinfo->id > 0 && pwgts[from]-vwgt < minwgt[from]) - continue; /* This cannot be moved! */ - - xgain = (myrinfo->id == 0 && myrinfo->ed > 0 ? graph->vsize[i] : 0); - - myedegrees = myrinfo->edegrees; - myndegrees = myrinfo->ndegrees; - - for (k=0; k= 0) - break; - } - if (k == myndegrees) - continue; /* break out if you did not find a candidate */ - - for (j=k+1; j maxwgt[to]) - continue; - if (myedegrees[j].gv > myedegrees[k].gv || - (myedegrees[j].gv == myedegrees[k].gv && myedegrees[j].ed > myedegrees[k].ed) || - (myedegrees[j].gv == myedegrees[k].gv && myedegrees[j].ed == myedegrees[k].ed && - itpwgts[myedegrees[k].pid]*pwgts[to] < itpwgts[to]*pwgts[myedegrees[k].pid])) - k = j; - } - - to = myedegrees[k].pid; - - j = 0; - if (xgain+myedegrees[k].gv > 0 || myedegrees[k].ed-myrinfo->id > 0) - j = 1; - else if (myedegrees[k].ed-myrinfo->id == 0) { - if ((iii&5) == 0 || pwgts[from] >= maxwgt[from] || itpwgts[from]*(pwgts[to]+vwgt) < itpwgts[to]*pwgts[from]) - j = 1; - } - if (j == 0) - continue; - - /*===================================================================== - * If we got here, we can now move the vertex from 'from' to 'to' - *======================================================================*/ - INC_DEC(pwgts[to], pwgts[from], vwgt); - graph->mincut -= myedegrees[k].ed-myrinfo->id; - graph->minvol -= (xgain+myedegrees[k].gv); - where[i] = to; - - IFSET(ctrl->dbglvl, DBG_MOVEINFO, printf("\t\tMoving %6d from %3d to %3d. Gain: [%4d %4d]. Cut: %6d, Vol: %6d\n", - i, from, to, xgain+myedegrees[k].gv, myedegrees[k].ed-myrinfo->id, graph->mincut, graph->minvol)); - - KWayVolUpdate(ctrl, graph, i, from, to, marker, phtable, updind); - - nmoves++; - - /* CheckVolKWayPartitionParams(ctrl, graph, nparts); */ - } - } - - IFSET(ctrl->dbglvl, DBG_REFINE, - printf("\t[%6d %6d], Balance: %5.3f, Nb: %6d. Nmoves: %5d, Cut: %6d, Vol: %6d\n", - pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)], - 1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nbnd, nmoves, graph->mincut, - graph->minvol)); - - if (graph->minvol == oldvol && graph->mincut == oldcut) - break; - } - - GKfree(&marker, &updind, &phtable, LTERM); - - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nvtxs); -} - - -/************************************************************************* -* This function performs k-way refinement -**************************************************************************/ -void Random_KWayVolRefineMConn(CtrlType *ctrl, GraphType *graph, int nparts, float *tpwgts, - float ubfactor, int npasses, int ffactor) -{ - int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; - int from, me, to, oldcut, oldvol, vwgt, nadd, maxndoms; - idxtype *xadj, *adjncy, *adjwgt; - idxtype *where, *pwgts, *perm, *bndptr, *bndind, *minwgt, *maxwgt, *itpwgts, *updind, *marker, *phtable; - idxtype *pmat, *pmatptr, *ndoms; - VEDegreeType *myedegrees; - VRInfoType *myrinfo; - - nvtxs = graph->nvtxs; - xadj = graph->xadj; - adjncy = graph->adjncy; - adjwgt = graph->adjwgt; - - bndptr = graph->bndptr; - bndind = graph->bndind; - - where = graph->where; - pwgts = graph->pwgts; - - /* Setup the weight intervals of the various subdomains */ - minwgt = idxwspacemalloc(ctrl, nparts); - maxwgt = idxwspacemalloc(ctrl, nparts); - itpwgts = idxwspacemalloc(ctrl, nparts); - tvwgt = idxsum(nparts, pwgts); - ASSERT(tvwgt == idxsum(nvtxs, graph->vwgt)); - - updind = idxmalloc(nvtxs, "Random_KWayVolRefine: updind"); - marker = idxsmalloc(nvtxs, 0, "Random_KWayVolRefine: marker"); - phtable = idxsmalloc(nparts, -1, "Random_KWayVolRefine: phtable"); - - pmat = ctrl->wspace.pmat; - ndoms = idxwspacemalloc(ctrl, nparts); - - ComputeVolSubDomainGraph(graph, nparts, pmat, ndoms); - - for (i=0; idbglvl, DBG_REFINE, - printf("VolPart: [%5d %5d]-[%5d %5d], Balance: %3.2f, Nv-Nb[%5d %5d]. Cut: %5d, Vol: %5d\n", - pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)], minwgt[0], maxwgt[0], - 1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nvtxs, graph->nbnd, - graph->mincut, graph->minvol)); - - for (pass=0; passmincut); - - maxndoms = ndoms[idxamax(nparts, ndoms)]; - - oldcut = graph->mincut; - oldvol = graph->minvol; - - RandomPermute(graph->nbnd, perm, 1); - for (nmoves=iii=0; iiinbnd; iii++) { - ii = perm[iii]; - if (ii >= graph->nbnd) - continue; - i = bndind[ii]; - myrinfo = graph->vrinfo+i; - - if (myrinfo->gv >= 0) { /* Total volume gain is too high */ - from = where[i]; - vwgt = graph->vwgt[i]; - - if (myrinfo->id > 0 && pwgts[from]-vwgt < minwgt[from]) - continue; /* This cannot be moved! */ - - xgain = (myrinfo->id == 0 && myrinfo->ed > 0 ? graph->vsize[i] : 0); - - myedegrees = myrinfo->edegrees; - myndegrees = myrinfo->ndegrees; - - /* Determine the valid domains */ - for (j=0; j maxndoms-1) { - phtable[to] = 0; - nadd = maxndoms; - break; - } - nadd++; - } - } - if (ndoms[to]+nadd > maxndoms) - phtable[to] = 0; - if (nadd == 0) - phtable[to] = 2; - } - - for (k=0; k= 0) - break; - } - if (k == myndegrees) - continue; /* break out if you did not find a candidate */ - - for (j=k+1; j maxwgt[to]) - continue; - if (myedegrees[j].gv > myedegrees[k].gv || - (myedegrees[j].gv == myedegrees[k].gv && myedegrees[j].ed > myedegrees[k].ed) || - (myedegrees[j].gv == myedegrees[k].gv && myedegrees[j].ed == myedegrees[k].ed && - itpwgts[myedegrees[k].pid]*pwgts[to] < itpwgts[to]*pwgts[myedegrees[k].pid])) - k = j; - } - - to = myedegrees[k].pid; - - j = 0; - if (xgain+myedegrees[k].gv > 0 || myedegrees[k].ed-myrinfo->id > 0) - j = 1; - else if (myedegrees[k].ed-myrinfo->id == 0) { - if ((iii&5) == 0 || phtable[myedegrees[k].pid] == 2 || pwgts[from] >= maxwgt[from] || itpwgts[from]*(pwgts[to]+vwgt) < itpwgts[to]*pwgts[from]) - j = 1; - } - - if (j == 0) - continue; - - for (j=0; jmincut -= myedegrees[k].ed-myrinfo->id; - graph->minvol -= (xgain+myedegrees[k].gv); - where[i] = to; - - IFSET(ctrl->dbglvl, DBG_MOVEINFO, printf("\t\tMoving %6d from %3d to %3d. Gain: [%4d %4d]. Cut: %6d, Vol: %6d\n", - i, from, to, xgain+myedegrees[k].gv, myedegrees[k].ed-myrinfo->id, graph->mincut, graph->minvol)); - - /* Update pmat to reflect the move of 'i' */ - pmat[from*nparts+to] += (myrinfo->id-myedegrees[k].ed); - pmat[to*nparts+from] += (myrinfo->id-myedegrees[k].ed); - if (pmat[from*nparts+to] == 0) { - ndoms[from]--; - if (ndoms[from]+1 == maxndoms) - maxndoms = ndoms[idxamax(nparts, ndoms)]; - } - if (pmat[to*nparts+from] == 0) { - ndoms[to]--; - if (ndoms[to]+1 == maxndoms) - maxndoms = ndoms[idxamax(nparts, ndoms)]; - } - - for (j=xadj[i]; j maxndoms) { - IFSET(ctrl->dbglvl, DBG_REFINE, printf("You just increased the maxndoms: %d %d\n", ndoms[me], maxndoms)); - maxndoms = ndoms[me]; - } - } - if (pmat[to*nparts+me] == 0) { - ndoms[to]++; - if (ndoms[to] > maxndoms) { - IFSET(ctrl->dbglvl, DBG_REFINE, printf("You just increased the maxndoms: %d %d\n", ndoms[to], maxndoms)); - maxndoms = ndoms[to]; - } - } - pmat[me*nparts+to] += adjwgt[j]; - pmat[to*nparts+me] += adjwgt[j]; - } - } - - KWayVolUpdate(ctrl, graph, i, from, to, marker, phtable, updind); - - nmoves++; - - /* CheckVolKWayPartitionParams(ctrl, graph, nparts); */ - } - } - - IFSET(ctrl->dbglvl, DBG_REFINE, - printf("\t[%6d %6d], Balance: %5.3f, Nb: %6d. Nmoves: %5d, Cut: %6d, Vol: %6d\n", - pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)], - 1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nbnd, nmoves, graph->mincut, - graph->minvol)); - - if (graph->minvol == oldvol && graph->mincut == oldcut) - break; - } - - GKfree(&marker, &updind, &phtable, LTERM); - - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nvtxs); -} - - - - -/************************************************************************* -* This function performs k-way refinement -**************************************************************************/ -void Greedy_KWayVolBalance(CtrlType *ctrl, GraphType *graph, int nparts, float *tpwgts, - float ubfactor, int npasses) -{ - int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; - int from, me, to, vwgt, gain; - idxtype *xadj, *adjncy, *adjwgt; - idxtype *where, *pwgts, *perm, *moved, *bndptr, *bndind, *minwgt, *maxwgt, *itpwgts, *updind, *marker, *phtable; - VEDegreeType *myedegrees; - VRInfoType *myrinfo; - PQueueType queue; - - nvtxs = graph->nvtxs; - xadj = graph->xadj; - adjncy = graph->adjncy; - adjwgt = graph->adjwgt; - - bndptr = graph->bndptr; - bndind = graph->bndind; - - where = graph->where; - pwgts = graph->pwgts; - - /* Setup the weight intervals of the various subdomains */ - minwgt = idxwspacemalloc(ctrl, nparts); - maxwgt = idxwspacemalloc(ctrl, nparts); - itpwgts = idxwspacemalloc(ctrl, nparts); - tvwgt = idxsum(nparts, pwgts); - ASSERT(tvwgt == idxsum(nvtxs, graph->vwgt)); - - updind = idxmalloc(nvtxs, "Random_KWayVolRefine: updind"); - marker = idxsmalloc(nvtxs, 0, "Random_KWayVolRefine: marker"); - phtable = idxsmalloc(nparts, -1, "Random_KWayVolRefine: phtable"); - - for (i=0; iadjwgtsum[idxamax(nvtxs, graph->adjwgtsum)]); - - IFSET(ctrl->dbglvl, DBG_REFINE, - printf("VolPart: [%5d %5d]-[%5d %5d], Balance: %3.2f, Nv-Nb[%5d %5d]. Cut: %5d, Vol: %5d [B]\n", - pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)], minwgt[0], maxwgt[0], - 1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nvtxs, graph->nbnd, - graph->mincut, graph->minvol)); - - - for (pass=0; passmincut); - /* Check to see if things are out of balance, given the tolerance */ - for (i=0; i maxwgt[i]) - break; - } - if (i == nparts) /* Things are balanced. Return right away */ - break; - - PQueueReset(&queue); - idxset(nvtxs, -1, moved); - - RandomPermute(graph->nbnd, perm, 1); - for (ii=0; iinbnd; ii++) { - i = bndind[perm[ii]]; - PQueueInsert(&queue, i, graph->vrinfo[i].gv); - moved[i] = 2; - } - - for (nmoves=0;;) { - if ((i = PQueueGetMax(&queue)) == -1) - break; - moved[i] = 1; - - myrinfo = graph->vrinfo+i; - from = where[i]; - vwgt = graph->vwgt[i]; - - if (pwgts[from]-vwgt < minwgt[from]) - continue; /* This cannot be moved! */ - - xgain = (myrinfo->id == 0 && myrinfo->ed > 0 ? graph->vsize[i] : 0); - - myedegrees = myrinfo->edegrees; - myndegrees = myrinfo->ndegrees; - - for (k=0; k minwgt[to] && - (xgain+myedegrees[k].gv < 0 || - (xgain+myedegrees[k].gv == 0 && myedegrees[k].ed-myrinfo->id < 0)) - ) - continue; - - - /*===================================================================== - * If we got here, we can now move the vertex from 'from' to 'to' - *======================================================================*/ - INC_DEC(pwgts[to], pwgts[from], vwgt); - graph->mincut -= myedegrees[k].ed-myrinfo->id; - graph->minvol -= (xgain+myedegrees[k].gv); - where[i] = to; - - IFSET(ctrl->dbglvl, DBG_MOVEINFO, printf("\t\tMoving %6d from %3d to %3d. Gain: [%4d %4d]. Cut: %6d, Vol: %6d\n", - i, from, to, xgain+myedegrees[k].gv, myedegrees[k].ed-myrinfo->id, graph->mincut, graph->minvol)); - - KWayVolUpdate(ctrl, graph, i, from, to, marker, phtable, updind); - - nmoves++; - - /*CheckVolKWayPartitionParams(ctrl, graph, nparts); */ - } - - IFSET(ctrl->dbglvl, DBG_REFINE, - printf("\t[%6d %6d], Balance: %5.3f, Nb: %6d. Nmoves: %5d, Cut: %6d, Vol: %6d\n", - pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)], - 1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nbnd, nmoves, graph->mincut, - graph->minvol)); - - } - - GKfree(&marker, &updind, &phtable, LTERM); - - PQueueFree(ctrl, &queue); - - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nvtxs); - idxwspacefree(ctrl, nvtxs); -} - - - -/************************************************************************* -* This function performs k-way refinement -**************************************************************************/ -void Greedy_KWayVolBalanceMConn(CtrlType *ctrl, GraphType *graph, int nparts, float *tpwgts, - float ubfactor, int npasses) -{ - int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; - int from, me, to, vwgt, gain, maxndoms, nadd; - idxtype *xadj, *adjncy, *adjwgt; - idxtype *where, *pwgts, *perm, *moved, *bndptr, *bndind, *minwgt, *maxwgt, *itpwgts, *updind, *marker, *phtable; - idxtype *pmat, *pmatptr, *ndoms; - VEDegreeType *myedegrees; - VRInfoType *myrinfo; - PQueueType queue; - - nvtxs = graph->nvtxs; - xadj = graph->xadj; - adjncy = graph->adjncy; - adjwgt = graph->adjwgt; - - bndptr = graph->bndptr; - bndind = graph->bndind; - - where = graph->where; - pwgts = graph->pwgts; - - /* Setup the weight intervals of the various subdomains */ - minwgt = idxwspacemalloc(ctrl, nparts); - maxwgt = idxwspacemalloc(ctrl, nparts); - itpwgts = idxwspacemalloc(ctrl, nparts); - tvwgt = idxsum(nparts, pwgts); - ASSERT(tvwgt == idxsum(nvtxs, graph->vwgt)); - - updind = idxmalloc(nvtxs, "Random_KWayVolRefine: updind"); - marker = idxsmalloc(nvtxs, 0, "Random_KWayVolRefine: marker"); - phtable = idxsmalloc(nparts, -1, "Random_KWayVolRefine: phtable"); - - pmat = ctrl->wspace.pmat; - ndoms = idxwspacemalloc(ctrl, nparts); - - ComputeVolSubDomainGraph(graph, nparts, pmat, ndoms); - - for (i=0; iadjwgtsum[idxamax(nvtxs, graph->adjwgtsum)]); - - IFSET(ctrl->dbglvl, DBG_REFINE, - printf("VolPart: [%5d %5d]-[%5d %5d], Balance: %3.2f, Nv-Nb[%5d %5d]. Cut: %5d, Vol: %5d [B]\n", - pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)], minwgt[0], maxwgt[0], - 1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nvtxs, graph->nbnd, - graph->mincut, graph->minvol)); - - - for (pass=0; passmincut); - /* Check to see if things are out of balance, given the tolerance */ - for (i=0; i maxwgt[i]) - break; - } - if (i == nparts) /* Things are balanced. Return right away */ - break; - - PQueueReset(&queue); - idxset(nvtxs, -1, moved); - - RandomPermute(graph->nbnd, perm, 1); - for (ii=0; iinbnd; ii++) { - i = bndind[perm[ii]]; - PQueueInsert(&queue, i, graph->vrinfo[i].gv); - moved[i] = 2; - } - - maxndoms = ndoms[idxamax(nparts, ndoms)]; - - for (nmoves=0;;) { - if ((i = PQueueGetMax(&queue)) == -1) - break; - moved[i] = 1; - - myrinfo = graph->vrinfo+i; - from = where[i]; - vwgt = graph->vwgt[i]; - - if (pwgts[from]-vwgt < minwgt[from]) - continue; /* This cannot be moved! */ - - xgain = (myrinfo->id == 0 && myrinfo->ed > 0 ? graph->vsize[i] : 0); - - myedegrees = myrinfo->edegrees; - myndegrees = myrinfo->ndegrees; - - /* Determine the valid domains */ - for (j=0; j maxndoms-1) { - phtable[to] = 0; - nadd = maxndoms; - break; - } - nadd++; - } - } - if (ndoms[to]+nadd > maxndoms) - phtable[to] = 0; - } - - for (k=0; k minwgt[to] && - (xgain+myedegrees[k].gv < 0 || - (xgain+myedegrees[k].gv == 0 && myedegrees[k].ed-myrinfo->id < 0)) - ) - continue; - - - /*===================================================================== - * If we got here, we can now move the vertex from 'from' to 'to' - *======================================================================*/ - INC_DEC(pwgts[to], pwgts[from], vwgt); - graph->mincut -= myedegrees[k].ed-myrinfo->id; - graph->minvol -= (xgain+myedegrees[k].gv); - where[i] = to; - - IFSET(ctrl->dbglvl, DBG_MOVEINFO, printf("\t\tMoving %6d from %3d to %3d. Gain: [%4d %4d]. Cut: %6d, Vol: %6d\n", - i, from, to, xgain+myedegrees[k].gv, myedegrees[k].ed-myrinfo->id, graph->mincut, graph->minvol)); - - /* Update pmat to reflect the move of 'i' */ - pmat[from*nparts+to] += (myrinfo->id-myedegrees[k].ed); - pmat[to*nparts+from] += (myrinfo->id-myedegrees[k].ed); - if (pmat[from*nparts+to] == 0) { - ndoms[from]--; - if (ndoms[from]+1 == maxndoms) - maxndoms = ndoms[idxamax(nparts, ndoms)]; - } - if (pmat[to*nparts+from] == 0) { - ndoms[to]--; - if (ndoms[to]+1 == maxndoms) - maxndoms = ndoms[idxamax(nparts, ndoms)]; - } - - for (j=xadj[i]; j maxndoms) { - IFSET(ctrl->dbglvl, DBG_REFINE, printf("You just increased the maxndoms: %d %d\n", ndoms[me], maxndoms)); - maxndoms = ndoms[me]; - } - } - if (pmat[to*nparts+me] == 0) { - ndoms[to]++; - if (ndoms[to] > maxndoms) { - IFSET(ctrl->dbglvl, DBG_REFINE, printf("You just increased the maxndoms: %d %d\n", ndoms[to], maxndoms)); - maxndoms = ndoms[to]; - } - } - pmat[me*nparts+to] += adjwgt[j]; - pmat[to*nparts+me] += adjwgt[j]; - } - } - - KWayVolUpdate(ctrl, graph, i, from, to, marker, phtable, updind); - - nmoves++; - - /*CheckVolKWayPartitionParams(ctrl, graph, nparts); */ - } - - IFSET(ctrl->dbglvl, DBG_REFINE, - printf("\t[%6d %6d], Balance: %5.3f, Nb: %6d. Nmoves: %5d, Cut: %6d, Vol: %6d\n", - pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)], - 1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nbnd, nmoves, graph->mincut, - graph->minvol)); - - } - - GKfree(&marker, &updind, &phtable, LTERM); - - PQueueFree(ctrl, &queue); - - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nvtxs); - idxwspacefree(ctrl, nvtxs); -} - - - - -/************************************************************************* -* This function updates the edge and volume gains as a result of moving -* v from 'from' to 'to'. -* The working arrays marker and phtable are assumed to be initialized to -* -1, and they left to -1 upon return -**************************************************************************/ -void KWayVolUpdate(CtrlType *ctrl, GraphType *graph, int v, int from, int to, - idxtype *marker, idxtype *phtable, idxtype *updind) -{ - int ii, iii, j, jj, k, kk, l, u, nupd, other, me, myidx; - idxtype *xadj, *vsize, *adjncy, *adjwgt, *where; - VEDegreeType *myedegrees, *oedegrees; - VRInfoType *myrinfo, *orinfo; - - xadj = graph->xadj; - adjncy = graph->adjncy; - adjwgt = graph->adjwgt; - vsize = graph->vsize; - where = graph->where; - - myrinfo = graph->vrinfo+v; - myedegrees = myrinfo->edegrees; - - - /*====================================================================== - * Remove the contributions on the gain made by 'v'. - *=====================================================================*/ - for (k=0; kndegrees; k++) - phtable[myedegrees[k].pid] = k; - phtable[from] = k; - - myidx = phtable[to]; /* Keep track of the index in myedegrees of the 'to' domain */ - - for (j=xadj[v]; jvrinfo+ii; - oedegrees = orinfo->edegrees; - - if (other == from) { - for (k=0; kndegrees; k++) { - if (phtable[oedegrees[k].pid] == -1) - oedegrees[k].gv += vsize[v]; - } - } - else { - ASSERT(phtable[other] != -1); - - if (myedegrees[phtable[other]].ned > 1) { - for (k=0; kndegrees; k++) { - if (phtable[oedegrees[k].pid] == -1) - oedegrees[k].gv += vsize[v]; - } - } - else { /* There is only one connection */ - for (k=0; kndegrees; k++) { - if (phtable[oedegrees[k].pid] != -1) - oedegrees[k].gv -= vsize[v]; - } - } - } - } - - for (k=0; kndegrees; k++) - phtable[myedegrees[k].pid] = -1; - phtable[from] = -1; - - - /*====================================================================== - * Update the id/ed of vertex 'v' - *=====================================================================*/ - myrinfo->ed += myrinfo->id-myedegrees[myidx].ed; - SWAP(myrinfo->id, myedegrees[myidx].ed, j); - SWAP(myrinfo->nid, myedegrees[myidx].ned, j); - if (myedegrees[myidx].ed == 0) - myedegrees[myidx] = myedegrees[--myrinfo->ndegrees]; - else - myedegrees[myidx].pid = from; - - /*====================================================================== - * Update the degrees of adjacent vertices and their volume gains - *=====================================================================*/ - marker[v] = 1; - updind[0] = v; - nupd = 1; - for (j=xadj[v]; jvrinfo+ii; - if (myrinfo->edegrees == NULL) { - myrinfo->edegrees = ctrl->wspace.vedegrees+ctrl->wspace.cdegree; - ctrl->wspace.cdegree += xadj[ii+1]-xadj[ii]; - } - myedegrees = myrinfo->edegrees; - - if (me == from) { - INC_DEC(myrinfo->ed, myrinfo->id, adjwgt[j]); - myrinfo->nid--; - } - else if (me == to) { - INC_DEC(myrinfo->id, myrinfo->ed, adjwgt[j]); - myrinfo->nid++; - } - - /* Remove the edgeweight from the 'pid == from' entry of the vertex */ - if (me != from) { - for (k=0; kndegrees; k++) { - if (myedegrees[k].pid == from) { - if (myedegrees[k].ned == 1) { - myedegrees[k] = myedegrees[--myrinfo->ndegrees]; - marker[ii] = 1; /* You do a complete .gv calculation */ - - /* All vertices adjacent to 'ii' need to be updated */ - for (jj=xadj[ii]; jjvrinfo+u; - oedegrees = orinfo->edegrees; - - for (kk=0; kkndegrees; kk++) { - if (oedegrees[kk].pid == from) { - oedegrees[kk].gv -= vsize[ii]; - break; - } - } - } - } - else { - myedegrees[k].ed -= adjwgt[j]; - myedegrees[k].ned--; - - /* Update the gv due to single 'ii' connection to 'from' */ - if (myedegrees[k].ned == 1) { - /* find the vertex 'u' that 'ii' was connected into 'from' */ - for (jj=xadj[ii]; jjvrinfo+u; - oedegrees = orinfo->edegrees; - - if (other == from) { - for (kk=0; kkndegrees; kk++) - oedegrees[kk].gv += vsize[ii]; - break; - } - } - } - } - - break; - } - } - } - - /* Add the edgeweight to the 'pid == to' entry of the vertex */ - if (me != to) { - for (k=0; kndegrees; k++) { - if (myedegrees[k].pid == to) { - myedegrees[k].ed += adjwgt[j]; - myedegrees[k].ned++; - - /* Update the gv due to non-single 'ii' connection to 'to' */ - if (myedegrees[k].ned == 2) { - /* find the vertex 'u' that 'ii' was connected into 'to' */ - for (jj=xadj[ii]; jjvrinfo+u; - oedegrees = orinfo->edegrees; - - if (u != v && other == to) { - for (kk=0; kkndegrees; kk++) - oedegrees[kk].gv -= vsize[ii]; - break; - } - } - } - break; - } - } - - if (k == myrinfo->ndegrees) { - myedegrees[myrinfo->ndegrees].pid = to; - myedegrees[myrinfo->ndegrees].ed = adjwgt[j]; - myedegrees[myrinfo->ndegrees++].ned = 1; - marker[ii] = 1; /* You do a complete .gv calculation */ - - /* All vertices adjacent to 'ii' need to be updated */ - for (jj=xadj[ii]; jjvrinfo+u; - oedegrees = orinfo->edegrees; - - for (kk=0; kkndegrees; kk++) { - if (oedegrees[kk].pid == to) { - oedegrees[kk].gv += vsize[ii]; - if (!marker[u]) { /* Need to update boundary etc */ - marker[u] = 2; - updind[nupd++] = u; - } - break; - } - } - } - } - } - - ASSERT(myrinfo->ndegrees <= xadj[ii+1]-xadj[ii]); - } - - /*====================================================================== - * Add the contributions on the volume gain due to 'v' - *=====================================================================*/ - myrinfo = graph->vrinfo+v; - myedegrees = myrinfo->edegrees; - for (k=0; kndegrees; k++) - phtable[myedegrees[k].pid] = k; - phtable[to] = k; - - for (j=xadj[v]; jvrinfo+ii; - oedegrees = orinfo->edegrees; - - if (other == to) { - for (k=0; kndegrees; k++) { - if (phtable[oedegrees[k].pid] == -1) - oedegrees[k].gv -= vsize[v]; - } - } - else { - ASSERT(phtable[other] != -1); - - if (myedegrees[phtable[other]].ned > 1) { - for (k=0; kndegrees; k++) { - if (phtable[oedegrees[k].pid] == -1) - oedegrees[k].gv -= vsize[v]; - } - } - else { /* There is only one connection */ - for (k=0; kndegrees; k++) { - if (phtable[oedegrees[k].pid] != -1) - oedegrees[k].gv += vsize[v]; - } - } - } - } - for (k=0; kndegrees; k++) - phtable[myedegrees[k].pid] = -1; - phtable[to] = -1; - - - /*====================================================================== - * Recompute the volume information of the 'hard' nodes, and update the - * max volume gain for all the update vertices - *=====================================================================*/ - ComputeKWayVolume(graph, nupd, updind, marker, phtable); - - - /*====================================================================== - * Maintain a consistent boundary - *=====================================================================*/ - for (j=0; jvrinfo+k; - - if ((myrinfo->gv >= 0 || myrinfo->ed-myrinfo->id >= 0) && graph->bndptr[k] == -1) - BNDInsert(graph->nbnd, graph->bndind, graph->bndptr, k); - - if (myrinfo->gv < 0 && myrinfo->ed-myrinfo->id < 0 && graph->bndptr[k] != -1) - BNDDelete(graph->nbnd, graph->bndind, graph->bndptr, k); - } - -} - - - - -/************************************************************************* -* This function computes the initial id/ed -**************************************************************************/ -void ComputeKWayVolume(GraphType *graph, int nupd, idxtype *updind, idxtype *marker, idxtype *phtable) -{ - int ii, iii, i, j, k, kk, l, nvtxs, me, other, pid; - idxtype *xadj, *vsize, *adjncy, *adjwgt, *where; - VRInfoType *rinfo, *myrinfo, *orinfo; - VEDegreeType *myedegrees, *oedegrees; - - nvtxs = graph->nvtxs; - xadj = graph->xadj; - vsize = graph->vsize; - adjncy = graph->adjncy; - adjwgt = graph->adjwgt; - where = graph->where; - rinfo = graph->vrinfo; - - - /*------------------------------------------------------------ - / Compute now the iv/ev degrees - /------------------------------------------------------------*/ - for (iii=0; iiiedegrees; - - if (marker[i] == 1) { /* Only complete gain updates go through */ - for (k=0; kndegrees; k++) - myedegrees[k].gv = 0; - - for (j=xadj[i]; jedegrees; - - for (kk=0; kkndegrees; kk++) - phtable[oedegrees[kk].pid] = kk; - phtable[other] = 1; - - if (me == other) { - /* Find which domains 'i' is connected and 'ii' is not and update their gain */ - for (k=0; kndegrees; k++) { - if (phtable[myedegrees[k].pid] == -1) - myedegrees[k].gv -= vsize[ii]; - } - } - else { - ASSERT(phtable[me] != -1); - - /* I'm the only connection of 'ii' in 'me' */ - if (oedegrees[phtable[me]].ned == 1) { - /* Increase the gains for all the common domains between 'i' and 'ii' */ - for (k=0; kndegrees; k++) { - if (phtable[myedegrees[k].pid] != -1) - myedegrees[k].gv += vsize[ii]; - } - } - else { - /* Find which domains 'i' is connected and 'ii' is not and update their gain */ - for (k=0; kndegrees; k++) { - if (phtable[myedegrees[k].pid] == -1) - myedegrees[k].gv -= vsize[ii]; - } - } - } - - for (kk=0; kkndegrees; kk++) - phtable[oedegrees[kk].pid] = -1; - phtable[other] = -1; - - } - } - - myrinfo->gv = -MAXIDX; - for (k=0; kndegrees; k++) { - if (myedegrees[k].gv > myrinfo->gv) - myrinfo->gv = myedegrees[k].gv; - } - if (myrinfo->ed > 0 && myrinfo->id == 0) - myrinfo->gv += vsize[i]; - - } - -} - - - -/************************************************************************* -* This function computes the total volume -**************************************************************************/ -int ComputeVolume(GraphType *graph, idxtype *where) -{ - int i, j, k, me, nvtxs, nparts, totalv; - idxtype *xadj, *adjncy, *vsize, *marker; - - - nvtxs = graph->nvtxs; - xadj = graph->xadj; - adjncy = graph->adjncy; - vsize = (graph->vsize == NULL ? graph->vwgt : graph->vsize); - - nparts = where[idxamax(nvtxs, where)]+1; - marker = idxsmalloc(nparts, -1, "ComputeVolume: marker"); - - totalv = 0; - - for (i=0; invtxs; - xadj = graph->xadj; - vsize = graph->vsize; - adjncy = graph->adjncy; - adjwgt = graph->adjwgt; - where = graph->where; - rinfo = graph->vrinfo; - - tmpdegrees = (VEDegreeType *)GKmalloc(nparts*sizeof(VEDegreeType), "CheckVolKWayPartitionParams: tmpdegrees"); - - /*------------------------------------------------------------ - / Compute now the iv/ev degrees - /------------------------------------------------------------*/ - for (i=0; iedegrees; - - for (k=0; kndegrees; k++) - tmpdegrees[k] = myedegrees[k]; - - tmprinfo.ndegrees = myrinfo->ndegrees; - tmprinfo.id = myrinfo->id; - tmprinfo.ed = myrinfo->ed; - - myrinfo = &tmprinfo; - myedegrees = tmpdegrees; - - - for (k=0; kndegrees; k++) - myedegrees[k].gv = 0; - - for (j=xadj[i]; jedegrees; - - if (me == other) { - /* Find which domains 'i' is connected and 'ii' is not and update their gain */ - for (k=0; kndegrees; k++) { - pid = myedegrees[k].pid; - for (kk=0; kkndegrees; kk++) { - if (oedegrees[kk].pid == pid) - break; - } - if (kk == orinfo->ndegrees) - myedegrees[k].gv -= vsize[ii]; - } - } - else { - /* Find the orinfo[me].ed and see if I'm the only connection */ - for (k=0; kndegrees; k++) { - if (oedegrees[k].pid == me) - break; - } - - if (oedegrees[k].ned == 1) { /* I'm the only connection of 'ii' in 'me' */ - for (k=0; kndegrees; k++) { - if (myedegrees[k].pid == other) { - myedegrees[k].gv += vsize[ii]; - break; - } - } - - /* Increase the gains for all the common domains between 'i' and 'ii' */ - for (k=0; kndegrees; k++) { - if ((pid = myedegrees[k].pid) == other) - continue; - for (kk=0; kkndegrees; kk++) { - if (oedegrees[kk].pid == pid) { - myedegrees[k].gv += vsize[ii]; - break; - } - } - } - - } - else { - /* Find which domains 'i' is connected and 'ii' is not and update their gain */ - for (k=0; kndegrees; k++) { - if ((pid = myedegrees[k].pid) == other) - continue; - for (kk=0; kkndegrees; kk++) { - if (oedegrees[kk].pid == pid) - break; - } - if (kk == orinfo->ndegrees) - myedegrees[k].gv -= vsize[ii]; - } - } - } - } - - myrinfo = rinfo+i; - myedegrees = myrinfo->edegrees; - - for (k=0; kndegrees; k++) { - pid = myedegrees[k].pid; - for (kk=0; kknvtxs; - xadj = graph->xadj; - adjncy = graph->adjncy; - adjwgt = graph->adjwgt; - where = graph->where; - rinfo = graph->vrinfo; - - idxset(nparts*nparts, 0, pmat); - - for (i=0; i 0) { - me = where[i]; - ndegrees = rinfo[i].ndegrees; - edegrees = rinfo[i].edegrees; - - k = me*nparts; - for (j=0; j 0) - ndoms[i]++; - } - } -} - - - -/************************************************************************* -* This function computes the subdomain graph -**************************************************************************/ -void EliminateVolSubDomainEdges(CtrlType *ctrl, GraphType *graph, int nparts, float *tpwgts) -{ - int i, ii, j, k, me, other, nvtxs, total, max, avg, totalout, nind, ncand, ncand2, target, target2, nadd; - int min, move, cpwgt, tvwgt; - idxtype *xadj, *adjncy, *vwgt, *adjwgt, *pwgts, *where, *maxpwgt, *pmat, *ndoms, *mypmat, *otherpmat, *ind; - KeyValueType *cand, *cand2; - - nvtxs = graph->nvtxs; - xadj = graph->xadj; - adjncy = graph->adjncy; - vwgt = graph->vwgt; - adjwgt = graph->adjwgt; - - where = graph->where; - pwgts = idxset(nparts, 0, graph->pwgts); - - maxpwgt = idxwspacemalloc(ctrl, nparts); - ndoms = idxwspacemalloc(ctrl, nparts); - otherpmat = idxwspacemalloc(ctrl, nparts); - ind = idxwspacemalloc(ctrl, nvtxs); - pmat = idxset(nparts*nparts, 0, ctrl->wspace.pmat); - - cand = (KeyValueType *)GKmalloc(nparts*sizeof(KeyValueType), "EliminateSubDomainEdges: cand"); - cand2 = (KeyValueType *)GKmalloc(nparts*sizeof(KeyValueType), "EliminateSubDomainEdges: cand"); - - /* Compute the pmat matrix */ - for (i=0; i 0) - k++; - } - ndoms[i] = k; - } - - /* Get into the loop eliminating subdomain connections */ - for (;;) { - total = idxsum(nparts, ndoms); - avg = total/nparts; - max = ndoms[idxamax(nparts, ndoms)]; - - /* printf("Adjacent Subdomain Stats: Total: %3d, Max: %3d, Avg: %3d\n", total, max, avg); */ - - if (max < 1.5*avg) - break; - - me = idxamax(nparts, ndoms); - mypmat = pmat + me*nparts; - totalout = idxsum(nparts, mypmat); - - /*printf("Me: %d, TotalOut: %d,\n", me, totalout);*/ - - /* Sort the connections according to their cut */ - for (ncand2=0, i=0; i 0) { - cand2[ncand2].key = mypmat[i]; - cand2[ncand2++].val = i; - } - } - ikeysort(ncand2, cand2); - - move = 0; - for (min=0; min totalout/(2*ndoms[me])) - break; - - other = cand2[min].val; - - /*printf("\tMinOut: %d to %d\n", mypmat[other], other);*/ - - idxset(nparts, 0, otherpmat); - - /* Go and find the vertices in 'other' that are connected in 'me' */ - for (nind=0, i=0; i 0) { - cand[ncand].key = -otherpmat[i]; - cand[ncand++].val = i; - } - } - ikeysort(ncand, cand); - - /* - * Go through and the select the first domain that is common with 'me', and - * does not increase the ndoms[target] higher than my ndoms, subject to the - * maxpwgt constraint. Traversal is done from the mostly connected to the least. - */ - target = target2 = -1; - for (i=0; i 0) { - if (pwgts[k] + cpwgt > maxpwgt[k]) /* Check if balance will go off */ - continue; - - for (j=0; j 0 && ndoms[j] >= ndoms[me]-1 && pmat[nparts*j+k] == 0) - break; - } - if (j == nparts) { /* No bad second level effects */ - for (nadd=0, j=0; j 0 && pmat[nparts*k+j] == 0) - nadd++; - } - - /*printf("\t\tto=%d, nadd=%d, %d\n", k, nadd, ndoms[k]);*/ - if (target2 == -1 && ndoms[k]+nadd < ndoms[me]) { - target2 = k; - } - if (nadd == 0) { - target = k; - break; - } - } - } - } - if (target == -1 && target2 != -1) - target = target2; - - if (target == -1) { - /* printf("\t\tCould not make the move\n");*/ - continue; - } - - /*printf("\t\tMoving to %d\n", target);*/ - - /* Update the partition weights */ - INC_DEC(pwgts[target], pwgts[other], cpwgt); - - /* Set all nind vertices to belong to 'target' */ - for (ii=0; iiwhere and tries to push them around to -* remove some of them -**************************************************************************/ -void EliminateVolComponents(CtrlType *ctrl, GraphType *graph, int nparts, float *tpwgts, float ubfactor) -{ - int i, ii, j, jj, k, me, nvtxs, tvwgt, first, last, nleft, ncmps, cwgt, ncand, other, target, deltawgt; - idxtype *xadj, *adjncy, *vwgt, *adjwgt, *where, *pwgts, *maxpwgt; - idxtype *cpvec, *touched, *perm, *todo, *cind, *cptr, *npcmps; - KeyValueType *cand; - int recompute=0; - - nvtxs = graph->nvtxs; - xadj = graph->xadj; - adjncy = graph->adjncy; - vwgt = graph->vwgt; - adjwgt = graph->adjwgt; - - where = graph->where; - pwgts = idxset(nparts, 0, graph->pwgts); - - touched = idxset(nvtxs, 0, idxwspacemalloc(ctrl, nvtxs)); - cptr = idxwspacemalloc(ctrl, nvtxs+1); - cind = idxwspacemalloc(ctrl, nvtxs); - perm = idxwspacemalloc(ctrl, nvtxs); - todo = idxwspacemalloc(ctrl, nvtxs); - maxpwgt = idxwspacemalloc(ctrl, nparts); - cpvec = idxwspacemalloc(ctrl, nparts); - npcmps = idxset(nparts, 0, idxwspacemalloc(ctrl, nparts)); - - for (i=0; i 0) { - if (first == last) { /* Find another starting vertex */ - cptr[++ncmps] = first; - ASSERT(touched[todo[0]] == 0); - i = todo[0]; - cind[last++] = i; - touched[i] = 1; - me = where[i]; - npcmps[me]++; - } - - i = cind[first++]; - k = perm[i]; - j = todo[k] = todo[--nleft]; - perm[j] = k; - - for (j=xadj[i]; j nparts) { /* There are more components than processors */ - cand = (KeyValueType *)GKmalloc(nparts*sizeof(KeyValueType), "EliminateSubDomainEdges: cand"); - - /* First determine the partition sizes and max allowed load imbalance */ - for (i=0; i .30*pwgts[me]) - continue; /* Skip the component if it is over 30% of the weight */ - - for (ncand=0, j=0; j 0) { - cand[ncand].key = -cpvec[j]; - cand[ncand++].val = j; - } - } - if (ncand == 0) - continue; - - ikeysort(ncand, cand); - - target = -1; - for (j=0; jmincut -= cpvec[target]; - recompute = 1; - } - } - - free(cand); - } - - if (recompute) { - int ttlv; - idxtype *marker; - - marker = idxset(nparts, -1, cpvec); - for (ttlv=0, i=0; ivsize[i]; - marker[where[adjncy[j]]] = i; - } - } - } - graph->minvol = ttlv; - } - - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nparts); - idxwspacefree(ctrl, nvtxs); - idxwspacefree(ctrl, nvtxs); - idxwspacefree(ctrl, nvtxs); - idxwspacefree(ctrl, nvtxs); - idxwspacefree(ctrl, nvtxs+1); - -} - -- cgit v1.3