To run benchmarks on GPGPU-Sim, you first need to place a copy or link to the configuration files (gpgpusim.config and the interconnect configuration file) in the simulation run directory. You can do this using the script "setup_config.sh" in this directory, which creates symbolic links. For example: ./setup_config.sh QuadroFX5800 To change the configuration, you need to first run ./setup_config.sh --cleanup The configuration string to use is a directory name in $GPGPUSIM_ROOT/configs NOTE ** As of GPGPU-Sim 2.1.0b, GPGPU-Sim works with applications without recompiling by using the PTX source embedded during the normal CUDA compilation flow. Preface your LD_LIBRARY_PATH environment variable with the locaton $GPGPUSIM_ROOT/lib